Systemic sclerosis & Raynaud's

Kidney spatial multiomics mapping decodes scleroderma renal crisis

Ann Rheum DisPublished spatially resolved cellular and molecular atlas

Authors' conclusion

This study advances our understanding of SRC beyond histopathology to the molecular and cellular landscape, providing an omics-driven framework to accelerate therapeutic target discovery in this rare, devastating disease.

Study context

Population
Patients with scleroderma renal crisis manifesting histopathologically as thrombotic microangiopathy, patients with lupus nephritis, and normal kidneyskidney biopsy samples analysed by spatial transcriptomics (discovery cohort), validation cohort size not stated
Participants
12 / 6 / 3
Exposure
Scleroderma renal crisis (SRC) vs lupus nephritis (LN) vs Normal kidneys
  • SRCn = 12
  • LNn = 6
  • Normal kidneysn = 3
Outcome
Histopathology on multiplexed imaging
Methodological detailsspatial transcriptomics (discovery cohort), validated in an expanded cohort by multiplexed imaging
  • Spatial transcriptomics (discovery cohort)
  • Validated in an expanded cohort by multiplexed imaging

Main finding

As reported in the abstract

  • Pathological triad of thrombotic microangiopathy (TMA), immune infiltration, and fibrotic remodelling in SRC kidneys

Observational data: associations, not effects.

Further findings

Shared and distinct pathways, SRC vs LN

SRC and LN shared activation of the complement cascade, type I interferon signalling, and fibrotic remodelling
SRC exhibited a distinct vascular-hypoxic axis

Spatial organization

Disease-specific glomerular niches at the interface between renal parenchymal cells and prominent myeloid immune cells

Molecular signatures across lesion stages

Multiple pathological pathways already upregulated in mild lesions, with selective enrichment in glomerular TMA and arterial injury, converging on injury and remodelling programmes in chronic lesions

Original publication

Kidney spatial multiomics mapping decodes scleroderma renal crisis. Ann Rheum Dis. Published 26 October 2026. doi:10.1016/j.ard.2026.09.011

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