Lupus & antiphospholipid syndrome

Differential molecular signatures in response to CD19-CAR T cell therapy compared with conventional pharmacotherapy in systemic lupus erythematosus

Ann Rheum DisPublished Mechanistic study

Authors' conclusion

CD19-CAR T cell therapy induces substantial suppression of key immunological pathways involved in SLE, including complement activation and type I interferon responses, accompanied by a metabolic reprogramming. Molecular profiles of remission after CD19-CAR T cell therapy differ from those induced by conventional SLE pharmacotherapy, suggesting more profound CD19-CAR T cell-induced biological alterations.

Study context

Population
Patients with systemic lupus erythematosus (SLE)
Participants
7 / 30 / 31
Comparison
CD19-CAR T cell therapy vs standard pharmacotherapy
  • CD19-CAR Tn = 7
  • Standard pharmacotherapy remissionn = 30reference
  • Rituximab, belimumab or cyclophosphamiden = 31reference
Outcome
Molecular pathway alterations
Methodological detailstranscriptomic comparison, single-cell RNA sequencing (pseudo-bulk), whole-blood transcriptome, Pathway analysis using Functional Analysis of Individual Microarray Expression and gene set enrichment analysis
  • Transcriptomic comparison
  • Single-cell RNA sequencing (pseudo-bulk)
  • Whole-blood transcriptome
  • Pathway analysis using Functional Analysis of Individual Microarray Expression and gene set enrichment analysis

Main finding

As reported in the abstract

  • CD19-CAR T-induced remission: marked suppression of complement activation, type I interferon, DNA damage response (DDR) and cell death pathways vs remission after conventional pharmacotherapy, with upregulation of lipid metabolism pathways
  • vs rituximab and belimumab: greater downregulation of type I/II interferon, DDR and chemokine pathways with CD19-CAR T
  • vs cyclophosphamide: greater suppression of interferon, mitochondrial and mammalian target of rapamycin signalling pathways with CD19-CAR T

Original publication

Differential molecular signatures in response to CD19-CAR T cell therapy compared with conventional pharmacotherapy in systemic lupus erythematosus. Ann Rheum Dis. Published 23 July 2025. doi:10.1016/j.ard.2025.06.2132

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