Autoinflammatory & rare systemic diseases

Genome-wide association studies reveal new insights into the genetic basis of IgG4-related disease in the Chinese Han population

Ann Rheum DisPublished Genome-wide association study

Authors' conclusion

This study identified multiple susceptibility loci for IgG4-RD, uncovering novel genetic variants closely linked to clinical features and disease prognosis.

Study context

Population
Chinese Han population with igG4-related disease (IgG4-RD) and controls1,115 patients, 10,154 controls passed QC
Participants
1,161 vs 10,539
Comparison
IgG4-RD patients vs controls
  • IgG4-RDn = 1,161
  • Controlsn = 10,539reference
Outcome
Genetic susceptibility loci for IgG4-RD
Methodological detailscase-control, 2 independent cohorts, human leukocyte antigen (HLA) imputation (Han-MHC reference), fine mapping, meta-analysis with Japanese cohort data
  • Case-control
  • 2 independent cohorts
  • HLA imputation (Han-MHC reference)
  • Fine mapping
  • Meta-analysis with Japanese cohort data

Pooled result

As reported in the abstract

Genome-wide significant SNPs (P < 5E-08) replicated in both cohorts

Single nucleotide polymorphisms (SNPs) surpassing genome-wide significance and replicated across both cohorts

22

Distinct genetic susceptibility loci

16

Fine mapping: independent HLA alleles

6

Fine mapping: independent amino acid mutations

2

Further pooled results

Association of genetic variants with clinical characteristics

Variants significantly associated with serum IgG4 levels, extent and pattern of organ involvement, clinical subtypes and relapse risk

Meta-analysis with Japanese cohort data

Confirmed known loci and revealed novel susceptibility variants

Original publication

Genome-wide association studies reveal new insights into the genetic basis of IgG4-related disease in the Chinese Han population. Ann Rheum Dis. Published 26 November 2025. doi:10.1016/j.ard.2025.10.028

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