Lupus & antiphospholipid syndrome

DNA methylation alterations in systemic lupus erythematosus: A systematic review of case-control studies

LupusPublished Systematic review of case-control studies

Authors' conclusion

The methylation status of some genes especially IFI44L, FOXP3, and MX1 has been suggested as promising SLE biomarkers. However, given the conflicting findings between studies because of potential confounders such as different sample types, methylation profiling methods, and ethnicity as well as shared DNA methylation patterns of SLE and other autoimmune diseases, DNA methylation biomarkers are currently not reliable diagnostic biomarkers and do not represent surrogate markers of SLE disease activity.

Study context

Population
Case-control studies assessing DNA methylation of specific genes in systemic lupus erythematosus (SLE) vs healthy controls; PubMed, Scopus, Google Scholar up to July 202244 studies
Participants
3,471 vs 1,028
Comparison
SLE patients vs healthy controls
  • SLEn = 3,471
  • Healthy controlsn = 1,028reference
Outcome
DNA methylation alterations in SLE vs healthy controls
Methodological detailsnon-high-throughput methylation techniques only, quality of bias assessment
  • Non-high-throughput methylation techniques only
  • Quality of bias assessment

Pooled result

As reported in the abstract

Sensitivity, specificity and diagnostic power of methylation levels reported only for IFI44L

5 studies

Correlation between methylation patterns and clinical parameters explored

22 studies

Remarkable association between DNA methylation status and clinical indices

16 publications

Further pooled results

Study and patient characteristics

Female, among studies reporting gender (n = 2853)
89.41%
Male, among studies reporting gender (n = 2853)
10.59%
Studies in adult patients
40
Studies on whole blood or PBMCs
22
Studies on unfractionated white blood cells
2
Studies on sorted blood cells
20

Original publication

DNA methylation alterations in systemic lupus erythematosus: A systematic review of case-control studies. Lupus. Published 27 December 2022. doi:10.1177/09612033221148099

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